PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G04580.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 378aa    MW: 40900.8 Da    PI: 5.6678
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G04580.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.81.4e-14174228155
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                      ++e+k+ +rk++NRe+ArrsR RK a+++ Lee v+ L  eN++L  +l   +++
  LPERR07G04580.1 174 DEEDKVKKRKESNRESARRSRSRKAARLKDLEEQVELLRVENSSLLRRLADANQK 228
                      579****************************************999777655554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.3E-11174228No hitNo description
SMARTSM003383.3E-13174238IPR004827Basic-leucine zipper domain
PfamPF001702.5E-11175228IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.082176228IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.31E-9178227No hitNo description
PfamPF124981.0E-21245352IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MLERCPSGWS LERFLEEELL DGVPAPPPPP AANPSPMPAE ARRNGDHEAV GMMPAAAEMD  60
PVEYNAMLKR KLDEDLAAVA MWRASGAIHS KSSLGNKTSL KKVGSSLSSQ KCIEGNGILA  120
QNKLGKTGGS GPHVNHSTEA HAKQATSGSS REPSPSEDDE MEGGADAIGN MILDEEDKVK  180
KRKESNRESA RRSRSRKAAR LKDLEEQVEL LRVENSSLLR RLADANQKYS VAAIDNRVLM  240
ADIEALRAKV RMAEDSVKMV TGTRQLHQAI PNMPSPLNAT SDASVPIQNN HPVNYEYFAN  300
AINAGVNSYM HEIPPPFQIS DSAEKIDLTD SLQLQQQQMA GLQHLQNGVC GGGASSNGYA  360
SWGSSLMDAS ELVNRELQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0534720.0AB053472.1 Oryza sativa mRNA for RISBZ1, complete cds.
GenBankAK2419940.0AK241994.1 Oryza sativa Japonica Group cDNA, clone: J075099M14, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645416.10.0PREDICTED: regulatory protein opaque-2
TrEMBLA0A0D9WW820.0A0A0D9WW82_9ORYZ; Uncharacterized protein
STRINGBGIOSGA024713-PA0.0(Oryza sativa Indica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.13e-22basic leucine zipper 25